Difference between revisions of "Plasma Cell Neoplasms Tables: Recurrent Cytogenomic Alterations"

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(reordered citations to be numerically ordered)
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|Recurrent
 
|Recurrent
 
|1
 
|1
|23010713 (2012)<ref name=":6">{{Cite journal|last=Bk|first=Zehentner|last2=L|first2=Hartmann|last3=Kr|first3=Johnson|last4=Cf|first4=Stephenson|last5=Db|first5=Chapman|last6=Me|first6=de Baca|last7=Da|first7=Wells|last8=Mr|first8=Loken|last9=B|first9=Tirtorahardjo|date=2012|title=Array-based karyotyping in plasma cell neoplasia after plasma cell enrichment increases detection of genomic aberrations|url=https://pubmed.ncbi.nlm.nih.gov/23010713/|language=en|pmid=23010713}}</ref>, 22833442 (2012)<ref name=":7">{{Cite journal|last=M|first=Stevens-Kroef|last2=Do|first2=Weghuis|last3=S|first3=Croockewit|last4=L|first4=Derksen|last5=J|first5=Hooijer|last6=N|first6=Elidrissi-Zaynoun|last7=A|first7=Siepman|last8=A|first8=Simons|last9=Ag|first9=Kessel|date=2012|title=High detection rate of clinically relevant genomic abnormalities in plasma cells enriched from patients with multiple myeloma|url=https://pubmed.ncbi.nlm.nih.gov/22833442/|language=en|pmid=22833442}}</ref>, 24987674 (2014)<ref name=":1" />,  27588520 (2016)<ref name=":8">{{Cite journal|last=N|first=Bolli|last2=Y|first2=Li|last3=V|first3=Sathiaseelan|last4=K|first4=Raine|last5=D|first5=Jones|last6=P|first6=Ganly|last7=F|first7=Cocito|last8=G|first8=Bignell|last9=Ma|first9=Chapman|date=2016|title=A DNA target-enrichment approach to detect mutations, copy number changes and immunoglobulin translocations in multiple myeloma|url=https://pubmed.ncbi.nlm.nih.gov/27588520/|language=en|doi=10.1038/bcj.2016.72|pmc=PMC5056967|pmid=27588520}}</ref>, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6">{{Cite journal|last=Bk|first=Zehentner|last2=L|first2=Hartmann|last3=Kr|first3=Johnson|last4=Cf|first4=Stephenson|last5=Db|first5=Chapman|last6=Me|first6=de Baca|last7=Da|first7=Wells|last8=Mr|first8=Loken|last9=B|first9=Tirtorahardjo|date=2012|title=Array-based karyotyping in plasma cell neoplasia after plasma cell enrichment increases detection of genomic aberrations|url=https://pubmed.ncbi.nlm.nih.gov/23010713/|language=en|pmid=23010713}}</ref>, 22833442 (2012)<ref name=":7">{{Cite journal|last=M|first=Stevens-Kroef|last2=Do|first2=Weghuis|last3=S|first3=Croockewit|last4=L|first4=Derksen|last5=J|first5=Hooijer|last6=N|first6=Elidrissi-Zaynoun|last7=A|first7=Siepman|last8=A|first8=Simons|last9=Ag|first9=Kessel|date=2012|title=High detection rate of clinically relevant genomic abnormalities in plasma cells enriched from patients with multiple myeloma|url=https://pubmed.ncbi.nlm.nih.gov/22833442/|language=en|pmid=22833442}}</ref>, 27588520 (2016)<ref name=":8">{{Cite journal|last=N|first=Bolli|last2=Y|first2=Li|last3=V|first3=Sathiaseelan|last4=K|first4=Raine|last5=D|first5=Jones|last6=P|first6=Ganly|last7=F|first7=Cocito|last8=G|first8=Bignell|last9=Ma|first9=Chapman|date=2016|title=A DNA target-enrichment approach to detect mutations, copy number changes and immunoglobulin translocations in multiple myeloma|url=https://pubmed.ncbi.nlm.nih.gov/27588520/|language=en|doi=10.1038/bcj.2016.72|pmc=PMC5056967|pmid=27588520}}</ref>
 
|-
 
|-
 
|1q21.2-q23
 
|1q21.2-q23
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|Recurrent
 
|Recurrent
 
|1
 
|1
|23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 27588520 (2016)<ref name=":8" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 27588520 (2016)<ref name=":8" />
 
|-
 
|-
 
|1q
 
|1q
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|Poor prognostic marker
 
|Poor prognostic marker
 
|1
 
|1
|23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
| rowspan="2" |2
 
| rowspan="2" |2
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|Recurrent
 
|Recurrent
 
|1
 
|1
|23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|3q21-23
 
|3q21-23
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|Recurrent
 
|Recurrent
 
|1
 
|1
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 27588520 (2016)<ref name=":8" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 27588520 (2016)<ref name=":8" />
 
|-
 
|-
 
|5p
 
|5p
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|Recurrent
 
|Recurrent
 
|2
 
|2
|25145975 (2015)<ref name=":2" /> 24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" /> 25145975 (2015)<ref name=":2" />  
 
|-
 
|-
 
|5q13.2
 
|5q13.2
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|Recurrent
 
|Recurrent
 
|2
 
|2
|25636340 (2015)<ref name=":0" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />
+
|25636340 (2015)<ref name=":0" />, 24987674 (2014)<ref name=":1" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|6pter-p22.3
 
|6pter-p22.3
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|Poor prognostic marker
 
|Poor prognostic marker
 
|2
 
|2
|25636340 (2015)<ref name=":0" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />  25145975 (2015)<ref name=":2" />
+
|25636340 (2015)<ref name=":0" />, 24987674 (2014)<ref name=":1" />, 25145975 (2015)<ref name=":2" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|6q11.1-q13
 
|6q11.1-q13
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|Recurrent
 
|Recurrent
 
|1
 
|1
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|7p
 
|7p
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|Recurrent
 
|Recurrent
 
|2
 
|2
|25145975 (2015)<ref name=":2" />, 24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" />, 25145975 (2015)<ref name=":2" />
 
|-
 
|-
 
| rowspan="6" |8
 
| rowspan="6" |8
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|Recurrent
 
|Recurrent
 
|2
 
|2
|25636340 (2015)<ref name=":0" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />  25145975 (2015)<ref name=":2" /> 24757046 (2014)<ref name=":5" />
+
|25636340 (2015)<ref name=":0" />, 24987674 (2014)<ref name=":1" />  25145975 (2015)<ref name=":2" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|8p23.1
 
|8p23.1
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|Recurrent
 
|Recurrent
 
|2
 
|2
|24757046 (2014)<ref name=":5" />, 27588520 (2016)<ref name=":8" />, 26338801 (2016)<ref>{{Cite journal|last=K|first=Rack|last2=S|first2=Vidrequin|last3=Jl|first3=Dargent|date=2016|title=Genomic profiling of myeloma: the best approach, a comparison of cytogenetics, FISH and array-CGH of 112 myeloma cases|url=https://pubmed.ncbi.nlm.nih.gov/26338801/|language=en|pmid=26338801}}</ref>,  24987674 (2014)<ref name=":1" />, 27811368-(2016)<ref name=":9">{{Cite journal|last=P|first=Krzeminski|last2=La|first2=Corchete|last3=Jl|first3=García|last4=L|first4=López-Corral|last5=E|first5=Fermiñán|last6=Em|first6=García|last7=Aa|first7=Martín|last8=Jm|first8=Hernández-Rivas|last9=R|first9=García-Sanz|date=2016|title=Integrative analysis of DNA copy number, DNA methylation and gene expression in multiple myeloma reveals alterations related to relapse|url=https://pubmed.ncbi.nlm.nih.gov/27811368/|language=en|doi=10.18632/oncotarget.13025|pmc=PMC5348347|pmid=27811368}}</ref>
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 27588520 (2016)<ref name=":8" />, 26338801 (2016)<ref>{{Cite journal|last=K|first=Rack|last2=S|first2=Vidrequin|last3=Jl|first3=Dargent|date=2016|title=Genomic profiling of myeloma: the best approach, a comparison of cytogenetics, FISH and array-CGH of 112 myeloma cases|url=https://pubmed.ncbi.nlm.nih.gov/26338801/|language=en|pmid=26338801}}</ref>,  27811368-(2016)<ref name=":9">{{Cite journal|last=P|first=Krzeminski|last2=La|first2=Corchete|last3=Jl|first3=García|last4=L|first4=López-Corral|last5=E|first5=Fermiñán|last6=Em|first6=García|last7=Aa|first7=Martín|last8=Jm|first8=Hernández-Rivas|last9=R|first9=García-Sanz|date=2016|title=Integrative analysis of DNA copy number, DNA methylation and gene expression in multiple myeloma reveals alterations related to relapse|url=https://pubmed.ncbi.nlm.nih.gov/27811368/|language=en|doi=10.18632/oncotarget.13025|pmc=PMC5348347|pmid=27811368}}</ref>
 
|-
 
|-
 
|8q24.3
 
|8q24.3
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|Recurrent
 
|Recurrent
 
|1
 
|1
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|9p
 
|9p
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|Recurrent
 
|Recurrent
 
|2
 
|2
|25145975 (2015)<ref name=":2" />   24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" />, 25145975 (2015)<ref name=":2" />  
 
|-
 
|-
 
|9q
 
|9q
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|Recurrent
 
|Recurrent
 
|
 
|
|25145975 (2015)<ref name=":2" />    24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" />, 25145975 (2015)<ref name=":2" />
 
|-
 
|-
 
|9q34.3
 
|9q34.3
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|Recurrent
 
|Recurrent
 
|1
 
|1
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|11p
 
|11p
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|Recurrent
 
|Recurrent
 
|2
 
|2
|25636340 (2015)<ref name=":0" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />
+
|25636340 (2015)<ref name=":0" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|12p
 
|12p
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|Poor prognostic marker
 
|Poor prognostic marker
 
|1
 
|1
|25145975 (2015)<ref name=":2" /> 24987674 (2014)<ref name=":1" />, 22833442 (2012)<ref name=":7" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />, 27588520 (2016)<ref name=":8" />,  
+
|25145975 (2015)<ref name=":2" /> 24987674 (2014)<ref name=":1" />, 22833442 (2012)<ref name=":7" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />, 27588520 (2016)<ref name=":8" />,
 
|-
 
|-
 
|13q14.11/q14.2
 
|13q14.11/q14.2
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|Better prognostic marker
 
|Better prognostic marker
 
|2
 
|2
|25636340 (2015)<ref name=":0" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />, 25145975 (2015)<ref name=":2" />
+
|25636340 (2015)<ref name=":0" />, 24987674 (2014)<ref name=":1" />, 25145975 (2015)<ref name=":2" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|14q/14
 
|14q/14
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|Recurrent
 
|Recurrent
 
|1
 
|1
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />  25145975 (2015)<ref name=":2" />
+
|24987674 (2014)<ref name=":1" />, 25145975 (2015)<ref name=":2" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />,
 
|-
 
|-
 
|15q24.1
 
|15q24.1
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|Recurrent
 
|Recurrent
 
|1
 
|1
|25636340 (2015)<ref name=":0" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />
+
|25636340 (2015)<ref name=":0" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|16q12.1-q12.2
 
|16q12.1-q12.2
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|Recurrent
 
|Recurrent
 
|3, 3
 
|3, 3
|23010713 (2012)<ref name=":6" />, 24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />
 
|-
 
|-
 
|17p
 
|17p
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|Predictive & prognostic
 
|Predictive & prognostic
 
|1
 
|1
|22833442 (2012)<ref name=":7" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />, 24429703-(2014)<ref name=":4" />
+
|24429703-(2014)<ref name=":4" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|17p13
 
|17p13
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|Recurrent
 
|Recurrent
 
|2, 3
 
|2, 3
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
| rowspan="3" |19
 
| rowspan="3" |19
Line 571: Line 571:
 
|Recurrent
 
|Recurrent
 
|2
 
|2
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />,
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|19p/ 19p13
 
|19p/ 19p13
Line 593: Line 593:
 
|Recurrent
 
|Recurrent
 
|2
 
|2
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|20/20q
 
|20/20q
Line 600: Line 600:
 
|Recurrent
 
|Recurrent
 
|2
 
|2
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />
+
|24987674 (2014)<ref name=":1" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|20/20q
 
|20/20q
Line 615: Line 615:
 
|Recurrent
 
|Recurrent
 
|1
 
|1
|22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 23010713 (2012)<ref name=":6" />, 24757046 (2014)<ref name=":5" />
+
|24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
| rowspan="2" |22
 
| rowspan="2" |22
Line 623: Line 623:
 
|Recurrent
 
|Recurrent
 
|2
 
|2
|25636340 (2015)<ref name=":0" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />
+
|25636340 (2015)<ref name=":0" />, 24987674 (2014)<ref name=":1" />, 24757046 (2014)<ref name=":5" />, 23010713 (2012)<ref name=":6" />, 22833442 (2012)<ref name=":7" />
 
|-
 
|-
 
|22q21
 
|22q21
Line 638: Line 638:
 
|Recurrent
 
|Recurrent
 
|2
 
|2
|22833442 (2012)<ref name=":7" />, 25145975 (2015)<ref name=":2" />
+
|25145975 (2015)<ref name=":2" />, 22833442 (2012)<ref name=":7" />  
 
|-
 
|-
 
|X
 
|X

Revision as of 14:24, 13 July 2020

Chromosome Region (whole chromosome or segmental, including cytobands) Abnormality Type (gain, loss, LOH) Relevant genes (if known) Significance (Recurrent, Diagnostic, Prognostic, Targeted treatment) Strength of Evidence (Level 1, 2, 3, see legend below table for criteria) References PMID (year)
1 1p32 Loss FAF1, CDKN2C Poor prognostic marker 1, 2 [1] 24987674 (2014)[2], 25145975 (2015)[3]
1p22.2-p22.1 Loss BARHL2, TGFBR3, and others; HSP90B3P, TGFER3, BRDT, EPHAX4, BTBD8 Prognostic 1, 3 24987674 (2014)[2]  25145975 (2015)[3] 26912802 (2016)[4]
1p21.3 Loss SNX7 Recurrent 2 24429703-(2014)[5]
1p13.2 Loss MAG13(kinase), BCL2 like and others Recurrent 3 24757046 (2014)[6]
1p12 Loss MAN1A2, FAM46C, GDAP2 Recurrent 2 [1] 24987674 (2014)[2]
1p cnLOH Recurrent 2 25145975 (2015)[3]
1p Loss Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8], 27588520 (2016)[9]
1q21.2-q23 Gain CKS1B and ANP32E Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8], 27588520 (2016)[9]
1q Gain Poor prognostic marker 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
2 2 Gain Recurrent 2 22833442 (2012)[8]
2q Loss Recurrent 3 23010713 (2012)[7]
3 3 Gain Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
3q21-23 Gain Recurrent 2 25145975 (2015)[3]
4 4p16.3 Loss FGFR3 and WHSC1 Recurrent 3 24987674 (2014)[2]
4p15.2 Loss LGI2, SEPSECS, PI4K2B and others Recurrent 3 24987674 (2014)[2]
4q35.1 Loss DCTD, ING2, and others Recurrent 2 26912802 (2016)[4]
5 5 Gain Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8], 27588520 (2016)[9]
5p Gain Recurrent 3 24987674 (2014)[2]
5p Loss Recurrent 2 22833442 (2012)[8]
5p14.3 Gain CDH12,10 Recurrent 3 24757046 (2014)[6]
5q Gain Recurrent 2 24987674 (2014)[2] 25145975 (2015)[3]
5q13.2 Loss OCLN, NAIP, and others Recurrent 2 26912802 (2016)[4]
6 6p Gain Recurrent 2 25636340 (2015)[1], 24987674 (2014)[2], 22833442 (2012)[8]
6pter-p22.3 Gain Recurrent 3 24987674 (2014)[2]
6q Loss Poor prognostic marker 2 25636340 (2015)[1], 24987674 (2014)[2], 25145975 (2015)[3], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
6q11.1-q13 Gain MTRNR2L9 Recurrent 3 26912802 (2016)[4]
6q16.3 Loss COQR, GRIK2 Recurrent 3 24987674 (2014)[2]
6q25.3 Loss IGFR3 Recurrent 3 24757046 (2014)[6]
6q16.3 Loss COQR, GRIK2 Recurrent 3 24987674 (2014)[2]
7 7 Gain Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
7p Gain Recurrent 3 24987674 (2014)[2]
7p15.2 Gain CBX3, etc Recurrent 3 26912802 (2016)[4]
7q Gain Recurrent 2 24987674 (2014)[2], 25145975 (2015)[3]
8 8p Loss Recurrent 2 25636340 (2015)[1], 24987674 (2014)[2]  25145975 (2015)[3], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
8p23.1 Loss DEFB4 and others Recurrent 2 26912802 (2016)[4]
8p21.3/p21.2 Loss TNFRSF10B, DOCK5 and others Recurrent 3 24757046 (2014)[6]  
8q Gain Recurrent 3 24987674 (2014)[2]
8q24.2 Gain/amplification and Loss MYC Recurrent 2 24987674 (2014)[2], 24757046 (2014)[6], 27588520 (2016)[9], 26338801 (2016)[10],  27811368-(2016)[11]
8q24.3 Gain MAPK15, TOP1MT, CYP11B11 (P450), ZNF41, 616, 707 and ZNF517 Recurrent 3 24757046 (2014)[6], 27811368-(2016)[11]
9 9 Gain Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
9p Gain Recurrent 2 24987674 (2014)[2], 25145975 (2015)[3]  
9q Gain Recurrent 24987674 (2014)[2], 25145975 (2015)[3]
9q34.3 Gain ZNF79, CDK9, SET Recurrent 3 24757046 (2014)[6]
10 10p Loss Recurrent 3 24987674 (2014)[2]
10q Loss Recurrent 3 24987674 (2014)[2]
10q23.31 Loss PTEN Recurrent 2 16112193 (2006)[12]
11 11 Gain Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
11p Gain Recurrent 3 24987674 (2014)[2]
11q Gain Recurrent 2 25145975 (2015)[3], 23010713 (2012)[7]
11q13.1/q13.4 Gain SCYL1, MAP3K11, CCND1, FGF4, FGF3, NUMA, and RELT Recurrent 3 24757046 (2014)[6]
11q22 Loss Recurrent 3 24987674 (2014)[2]
11q22.1-q22.3 Homozygous Loss BIRC3, BIRC2, MMP cluster Recurrent 3 24987674 (2014)[2], 22529291 (2012)[13]
12 12p Loss Recurrent 2 25636340 (2015)[1], 24987674 (2014)[2], 24757046 (2014)[6], 22833442 (2012)[8]
12p LOH Recurrent 2 25145975 (2015)[3], 22833442 (2012)[8]
12p13.1 Loss CDKN1B, APOLD1 Recurrent 3 24987674 (2014)[2]
13 13q/13 Loss Poor prognostic marker 1 25145975 (2015)[3] 24987674 (2014)[2], 22833442 (2012)[8], 23010713 (2012)[7], 24757046 (2014)[6], 27588520 (2016)[9],
13q14.11/q14.2 Loss TNFSF11, RB1, P2RY5, RCBTB2 Poor prognostic marker 1 24757046 (2014)[6], 24987674 (2014)[2], 25636340 (2015)[1]
13q32.2 Loss TGDS Recurrent 2 24429703-(2014)[5]
14 14q/14 Loss Better prognostic marker 2 25636340 (2015)[1], 24987674 (2014)[2], 25145975 (2015)[3], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
14q/14 Gain Recurrent 3 23010713 (2012)[7]
14q cnLOH Recurrent 2 25145975 (2015)[3], 22833442 (2012)[8]
14q24.1-q24.3 Loss MLH3 Recurrent 2 26912802 (2016)[4]
14q32.32 Homozygous Loss RCOR1, TRAF3, AMN, CDC42BPB Recurrent 3 24987674 (2014)[2]
15 15 Gain Recurrent 1 24987674 (2014)[2], 25145975 (2015)[3], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8],
15q24.1 Gain CYP11A1, ARID3B, CSK, etc. Recurrent 3 26912802 (2016)[4]
16 16p11.2 Loss TP53TG3 Recurrent 3 26912802 (2016)[4]
16q Loss Recurrent 1 25636340 (2015)[1], 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
16q12.1-q12.2 Homozygous Loss CYLD, SALL1 Recurrent 3 24987674 (2014)[2]
16q24.3 Loss CBFA2T3 and others Recurrent 3 24757046 (2014)[6]
16 cnLOH Recurrent 2 22833442 (2012)[8]
17 17p/17 Gain Recurrent 3, 3 24987674 (2014)[2], 23010713 (2012)[7]
17p Loss Predictive & prognostic 1 24429703-(2014)[5], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
17p13 Loss ATP1B2, TP53, WRAP5, EFNB3 Predictive & prognostic 1 24987674 (2014)[2], 27588520 (2016)[9]
17 cnLOH Recurrent 2 22833442 (2012)[8]
17q21.33 and 17qter Gain Recurrent 3 24987674 (2014)[2]
17q25 Gain Recurrent 2 22833442 (2012)[8]
18 18 Gain Recurrent 2, 3 24987674 (2014)[2], 22833442 (2012)[8]
19 19 Gain Recurrent 2 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
19p/ 19p13 Gain ICAM4,ICAM4, IBCL2L12, TYK2, IL2, and DNMT1 Recurrent 3 24987674 (2014)[2], 26912802 (2016)[4], 24757046 (2014)[6]
19q Gain Recurrent 2 24987674 (2014)[2], 25145975 (2015)[3]
20 20p Loss Recurrent 2 24987674 (2014)[2], 22833442 (2012)[8]
20/20q Gain Recurrent 2 24987674 (2014)[2], 22833442 (2012)[8]
20/20q Loss Recurrent 3 24987674 (2014)[2], 23010713 (2012)[7]
21 21 Gain Recurrent 1 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
22 22 Loss Recurrent 2 25636340 (2015)[1], 24987674 (2014)[2], 24757046 (2014)[6], 23010713 (2012)[7], 22833442 (2012)[8]
22q21 mostly Gain PRAME Recurrent, Associated with relapse 2 27811368-(2016)[11]
X X Gain/ Loss Recurrent 2 25145975 (2015)[3], 22833442 (2012)[8]
X LOH Recurrent 2 25145975 (2015)[3]
Xp Loss Recurrent 3 24987674 (2014)[2]
Xp22.33 Loss SHOX, CRLF2, IL3RA Recurrent 3 26912802 (2016)[4]
Xq Gain (in males) Poor prognostic marker 2 25636340 (2015)[1], 24987674 (2014)[2]
Xq Loss Recurrent 3 24987674 (2014)[2]
Xq21.31-q21.32 Loss PABPC5, PCDHX Recurrent 3 26912802 (2016)[4]
Xq27.3-q28 Gain AFF2, MTMR1, etc Recurrent 3 26912802 (2016)[4]
Y Y Loss 2 25636340 (2015)[1]
Genome wide load of CNA > 100Mb gain/loss associated with significant change in GEP at relapse 2 27811368-(2016)[11]
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