Difference between revisions of "FGFR1"
[unchecked revision] | [unchecked revision] |
Brian.Davis (talk | contribs) |
Brian.Davis (talk | contribs) |
||
Line 48: | Line 48: | ||
==External Links== | ==External Links== | ||
− | '''[http://atlasgeneticsoncology.org/Genes/AML1ID52.html '' | + | '''[http://atlasgeneticsoncology.org/Genes/AML1ID52.html ''FGFR1'' by Atlas of Genetics and Cytogenetics in Oncology and Haematology]''' - detailed gene information |
− | '''[https://cancer.sanger.ac.uk/cosmic/gene/analysis?ln= | + | '''[https://cancer.sanger.ac.uk/cosmic/gene/analysis?ln=FGFR1 ''FGFR1'' by COSMIC]''' - sequence information, expression, catalogue of mutations |
− | '''[https://civicdb.org/events/genes/43/summary/variants/807/summary '' | + | '''[https://civicdb.org/events/genes/43/summary/variants/807/summary ''FGFR1'' by CIViC]''' - general knowledge and evidence-based variant specific information |
− | '''[https://pecan.stjude.cloud/proteinpaint/ | + | '''[https://pecan.stjude.cloud/proteinpaint/FGFR1 ''FGFR1'' by St. Jude ProteinPaint]''' mutational landscape and matched expression data. |
− | '''[https://pmkb.weill.cornell.edu/search?utf8=%E2%9C%93&search= | + | '''[https://pmkb.weill.cornell.edu/search?utf8=%E2%9C%93&search=FGFR1 ''FGFR1'' by Precision Medicine Knowledgebase (Weill Cornell)]''' - manually vetted interpretations of variants and CNVs |
− | '''[http://www.cancerindex.org/geneweb/CBFA2.htm '' | + | '''[http://www.cancerindex.org/geneweb/CBFA2.htm ''FGFR1'' by Cancer Index]''' - gene, pathway, publication information matched to cancer type |
− | '''[http://oncokb.org/#/gene/ | + | '''[http://oncokb.org/#/gene/FGFR1 ''FGFR1'' by OncoKB]''' - mutational landscape, mutation effect, variant classification |
− | '''[https://www.ncbi.nlm.nih.gov/gene/861 '' | + | '''[https://www.ncbi.nlm.nih.gov/gene/861 ''FGFR1'' by NCBI Gene]''' - brief gene overview |
− | '''[https://www.mycancergenome.org/content/gene/ | + | '''[https://www.mycancergenome.org/content/gene/FGFR1/ ''FGFR1'' by My Cancer Genome]''' - brief gene overview |
− | '''[https://www.uniprot.org/uniprot/Q01196 '' | + | '''[https://www.uniprot.org/uniprot/Q01196 ''FGFR1'' by UniProt]''' - protein and molecular structure and function |
− | '''[https://pfam.xfam.org/family/PF00853 '' | + | '''[https://pfam.xfam.org/family/PF00853 ''FGFR1' by Pfam]''' - gene and protein structure and function information |
− | '''[http://www.genecards.org/cgi-bin/carddisp.pl?gene= | + | '''[http://www.genecards.org/cgi-bin/carddisp.pl?gene=FGFR1 ''FGFR1'' by GeneCards]''' - general gene information and summaries |
− | '''[http://www.omim.org/entry/151385 '' | + | '''[http://www.omim.org/entry/151385 ''FGFR1'' by OMIM]''' - compendium of human genes and genetic phenotypes |
− | '''[https://databases.lovd.nl/shared/genes/ | + | '''[https://databases.lovd.nl/shared/genes/FGFR1 ''FGFR1' by LOVD(3)]''' - Leiden Open Variation Database |
− | '''[http://www.unav.es/genetica/TICdb/results.php?hgnc= | + | '''[http://www.unav.es/genetica/TICdb/results.php?hgnc=FGFR1 ''FGFR1'' by TICdb]''' - database of Translocation breakpoints In Cancer |
==References== | ==References== |
Revision as of 12:22, 10 October 2018
Primary Author(s)*
Put your text here
Synonyms
FLT2
Genomic Location
Cytoband: Put your text here. EXAMPLE: 17p13.1
Genomic Coordinates:
Put your text here
EXAMPLE: chr17:7,571,720-7,590,868 [hg19]
EXAMPLE: chr17:7,668,402-7,687,538 [hg38]
Cancer Category/Type
Put your text here
Gene Overview
Put your text here.
Common Alteration Types
Put your text here and/or fill in the table with an X where applicable
Copy Number Loss | Copy Number Gain | LOH | Loss-of-Function Mutation | Gain-of-Function Mutation | Translocation/Fusion |
---|---|---|---|---|---|
EXAMPLE: X | EXAMPLE: X | EXAMPLE: X | EXAMPLE: X | EXAMPLE: X | EXAMPLE: X |
Internal Pages
Put your text here
EXAMPLE Germline Cancer Predisposition Genes
External Links
FGFR1 by Atlas of Genetics and Cytogenetics in Oncology and Haematology - detailed gene information
FGFR1 by COSMIC - sequence information, expression, catalogue of mutations
FGFR1 by CIViC - general knowledge and evidence-based variant specific information
FGFR1 by St. Jude ProteinPaint mutational landscape and matched expression data.
FGFR1 by Precision Medicine Knowledgebase (Weill Cornell) - manually vetted interpretations of variants and CNVs
FGFR1 by Cancer Index - gene, pathway, publication information matched to cancer type
FGFR1 by OncoKB - mutational landscape, mutation effect, variant classification
FGFR1 by NCBI Gene - brief gene overview
FGFR1 by My Cancer Genome - brief gene overview
FGFR1 by UniProt - protein and molecular structure and function
FGFR1' by Pfam - gene and protein structure and function information
FGFR1 by GeneCards - general gene information and summaries
FGFR1 by OMIM - compendium of human genes and genetic phenotypes
FGFR1' by LOVD(3) - Leiden Open Variation Database
FGFR1 by TICdb - database of Translocation breakpoints In Cancer
References
EXAMPLE Book
- Arber DA, et al., (2008). Acute myeloid leukaemia with recurrent genetic abnormalities, in World Health Organization Classification of Tumours of Haematopoietic and Lymphoid Tissues, 4th edition. Swerdlow SH, Campo E, Harris NL, Jaffe ES, Pileri SA, Stein H, Thiele J, Vardiman JW, Editors. IARC Press: Lyon, France, p117-118.
EXAMPLE Journal Article
- Li Y, et al., (2001). Fusion of two novel genes, RBM15 and MKL1, in the t(1;22)(p13;q13) of acute megakaryoblastic leukemia. Nat Genet 28:220-221, PMID 11431691.
Notes
*Primary authors will typically be those that initially create and complete the content of a page. If a subsequent user modifies the content and feels the effort put forth is of high enough significance to warrant listing in the authorship section, please contact the CCGA coordinators (contact information provided on the homepage). Additional global feedback or concerns are also welcome.