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| ==Primary Author(s)== | | ==Primary Author(s)== |
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− | Linda D Cooley | + | Linda D Cooley, MD, MBA |
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| __TOC__ | | __TOC__ |
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| Histopathology – astrocytic morphology – can range from diffuse low-grade glioma to high grade glioma. | | Histopathology – astrocytic morphology – can range from diffuse low-grade glioma to high grade glioma. |
| H3 K27M-mutant gliomas can display a broad spectrum of histological features, including giant, epithelioid, and rhabdoid cells; primitive neuroectodermal tumor–like foci; ependymal-like areas; sarcomatous transformation, as well as features that may wrongly suggest circumscribed gliomas such as neuropil-like islands, pilomyxoid features, ganglionic differentiation, and pleomorphic xanthoastrocytoma-like areas. | | H3 K27M-mutant gliomas can display a broad spectrum of histological features, including giant, epithelioid, and rhabdoid cells; primitive neuroectodermal tumor–like foci; ependymal-like areas; sarcomatous transformation, as well as features that may wrongly suggest circumscribed gliomas such as neuropil-like islands, pilomyxoid features, ganglionic differentiation, and pleomorphic xanthoastrocytoma-like areas. |
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| ==Immunophenotype== | | ==Immunophenotype== |
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| |Negative (subset) || ATRX | | |Negative (subset) || ATRX |
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− | ===Additional Description:===
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− | Put your text here
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− | ==Chromosomal Rearrangements (Gene Fusions)==
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− | {| class="wikitable sortable"
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− | ! Chromosomal Rearrangement !! Genes in Fusion (5’ or 3’ Segments) !! Pathogenic Derivative !! Prevalence
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− | |t(9;22) || BCR-ABL1 || der(22) || 5%
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− | |t(8;21) || RUNX1-RUNXT1 || der(8) || 5%
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− | ===Additional Description:===
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| ==Characteristic Chromosomal Aberrations / Patterns== | | ==Characteristic Chromosomal Aberrations / Patterns== |
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| H3-K27M mutation defines the entity. K27M mutation occurs in either of 2 genes, H3F3A or HIST1H3B, which encode the histone H3 variants, H3.3 and H3.1, respectively (3). | | H3-K27M mutation defines the entity. K27M mutation occurs in either of 2 genes, H3F3A or HIST1H3B, which encode the histone H3 variants, H3.3 and H3.1, respectively (3). |
− | Cooperating genetic alterations include: TP53 and ATRX mutations. A subset of K27M+ DIPGs have ACVR1 missense mutations (encodes the activin A receptor type-1 transmembrane protein, that lead to activation of the BMP-TGF signaling pathway). Other alterations found in K27M+ DIPGs include PIK3CA mutation, PDGFRA mutation or amplification, PPM1D mutation, and amplification of cell cycle genes including CCND1, CDK4 and CDK6 (3). | + | Cooperating genetic alterations include: TP53 and ATRX mutations. A subset of K27M+ DIPGs have ACVR1 missense mutations (encodes the activin A receptor type-1 transmembrane protein, that lead to activation of the BMP-TGF signaling pathway). Other alterations found in K27M+ DIPGs include PIK3CA mutation, PDGFRA mutation or amplification, PPM1D mutation, and amplification of cell cycle genes including CCND1, CDK4 and CDK6 (3). |
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| ==Genomic Gain/Loss/LOH== | | ==Genomic Gain/Loss/LOH== |
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| ===Additional Description:=== | | ===Additional Description:=== |
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− | Mutually exclusive: IDH1 mutation, EGFR amplification | + | '''Mutually exclusive''': IDH1 mutation, EGFR amplification |
| Rare co-occurrence: BRAF V600E | | Rare co-occurrence: BRAF V600E |
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| ==Gene Mutations (SNV/INDEL)== | | ==Gene Mutations (SNV/INDEL)== |
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| {| class="wikitable sortable" | | {| class="wikitable sortable" |
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− | ! Gene !! Mutation !! Oncogene/Tumor Suppressor/Other !! Presumed Mechanism (LOF/GOF/Other; Driver/Passenger) !! Prevalence (COSMIC/TCGA/Other) | + | ! Mutation % !! Mutation |
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| + | | 100% || H3F3A or HIST1H3B/C K27M mutation – by definition |
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− | | TP53 || R273H || Tumor Suppressor || LOF || 20% | + | | ~70% || TP53, PPM1D, CHEK2, ATM |
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| + | | ~50% || PDGFRA, PIK3CA, PIK3R1, PTEN |
| + | |- |
| + | | ~20% || ACVR1 (DIPG) |
| |} | | |} |
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− | ===Additional Description:===
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− | *Other Mutations
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− | Put your text here
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− | *Concomitant Mutations
| + | ! Other Mutations !! Concomitant Mutations |
− | Put your text here
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− | *Secondary Mutations
| + | | || C228T TERT promoter mut |
− | Put your text here
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− | *Mutually Exclusive
| + | | || activating mutation or fusions targeting FGFR1 (1) |
− | Put your text here
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| + | | || NTRK fusion ~4% pontine gliomas |
| + | |} |
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| ==Epigenomics (Methylation)== | | ==Epigenomics (Methylation)== |
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| ==Links== | | ==Links== |
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| ==References== | | ==References== |
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| 8. Khuong-Quang D-A, et al. K27M mutation in histone H3.3 defines clinically and biologically distinct subgroups of pediatric diffuse intrinsic pontine gliomas. Acta Neuropathologica 2012;124:439-447. | | 8. Khuong-Quang D-A, et al. K27M mutation in histone H3.3 defines clinically and biologically distinct subgroups of pediatric diffuse intrinsic pontine gliomas. Acta Neuropathologica 2012;124:439-447. |
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| + | [[Category:Brain, Cancer Genes H, Diseases G]] |